PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_31899g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family MYB_related
Protein Properties Length: 79aa    MW: 8851.27 Da    PI: 8.1987
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_31899g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.7e-072761136
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS- CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRt 36
                     rg W+ +Ed +l ++v + G   +W+ +a+  g  ++
    MA_31899g0010 27 RGFWSLDEDNKLTNYVMRNGLTgCWNYVAKQAG--KS 61
                     799*****************999********98..44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.3E-52267IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-62357IPR009057Homeodomain-like
CDDcd001670.006233069No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
MGCTVGQPQG VLEGEVVLPT ASKPKLRGFW SLDEDNKLTN YVMRNGLTGC WNYVAKQAGK  60
SIISLIFYFF FAQFNIIEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.13e-09myb domain protein 83