PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_32651g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 219aa    MW: 24533.7 Da    PI: 4.6145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_32651g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.7e-202573355
            AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   y+GVr+++ +g+Wv+eIr+p   gkrkr++lg+f tae+Aa+a++ a+++l+g
  MA_32651g0010 25 YRGVRRRS-WGKWVSEIREP---GKRKRIWLGSFETAEMAARAYDVAALSLKG 73
                   9****887.**********9...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.71E-222483IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-312483IPR001471AP2/ERF domain
PROSITE profilePS5103223.922481IPR001471AP2/ERF domain
SMARTSM003802.6E-352487IPR001471AP2/ERF domain
PRINTSPR003679.1E-112536IPR001471AP2/ERF domain
CDDcd000183.34E-322583No hitNo description
PfamPF008476.4E-132573IPR001471AP2/ERF domain
PRINTSPR003679.1E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDGTGRSFDN GADGNRNHDA RPRTYRGVRR RSWGKWVSEI REPGKRKRIW LGSFETAEMA  60
ARAYDVAALS LKGKSALPNF PDSVHTLPRP SSLDPRDIQL AAAQAASELM QPMVSSNISS  120
WQPQDQNLFD SNNNVNSDSV SVSDHDHHEL STRPHGPFSL DEEFFDFDSP NWQMDMGADA  180
DFVLPPPLNC FDETRAYNYN SVDDLNGPDQ GISPWSDSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-181481472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12847RRRSWGKWVSEIREPGKRKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6R4W14e-38A0A0D6R4W1_ARACU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.12e-37ERF family protein