PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_33471g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 620aa    MW: 67631 Da    PI: 5.5703
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_33471g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.32.9e-12189249262
                    XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                    ++ kr  r+++NRe+A+ sRqRKk +++eLeekvk++ +   +L +++  ++ e  klk++
  MA_33471g0010 189 EDEKRKARLMRNRESAQLSRQRKKSYVDELEEKVKSMNSTIAELNNTIAFINAENMKLKQQ 249
                    6789******************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-14188252IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852190253IPR004827Basic-leucine zipper domain
PfamPF001705.3E-11191250IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-11192250No hitNo description
Gene3DG3DSA:1.20.5.1706.5E-17192251No hitNo description
CDDcd147041.29E-17193244No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006990Biological Processpositive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0009408Biological Processresponse to heat
GO:0005635Cellular Componentnuclear envelope
GO:0005654Cellular Componentnucleoplasm
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016020Cellular Componentmembrane
GO:0048471Cellular Componentperinuclear region of cytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MSPQNHPPET CSLADTLRTG MEPLTFPQQE SVDLEDLLDD TLFSFPFEEQ QWVDCLLDDA  60
FQVDVSIPFD DFGSDYAPAF VDETVSNPQS SDGGSATSSV NGSVSDVDES NGEMISGAPS  120
PPPLPSSSPP SSSDSSSDQS TVVVEDDQRK RKRETEAEDG NKQGLISSSD TTETRTNSSS  180
SRSRCTGDED EKRKARLMRN RESAQLSRQR KKSYVDELEE KVKSMNSTIA ELNNTIAFIN  240
AENMKLKQQL GALCQPPNTA NQHHVTPLPM PYPWPPFPAY PGPVMAGGNG GRVPLLPIPR  300
LKSHSQQQPS TPYKDRKPSK SAAAAVSSEQ KPAKKRIKKV ASIAFLGFFF FIFFILGGIG  360
QLPIAKDLIF RESSSRELLG NSIVELSRAG LLLKPGGGGR VLTSWDEGGN FTEVTVRNNP  420
LGDVHVDMDI GTGRLPGSEK RHDKRNATFT DHYTHSDSDL MNMNSYIYPE KNGSAALVAS  480
LFVPRNDKLV KIDGNLIIHA VLAGEKASRA SSASQSRGNK DGHVDTISLK KESEKNSLAV  540
RTERHRALAA AAAATTDSGR NVDTNTKFLG DAAENPNYRA LASNFRTSYR DDMESTAVDR  600
SLQQWFQEGL AGNGRSFLYT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00345DAPTransfer from AT3G10800Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1198680.0BT119868.1 Picea glauca clone GQ04111_H12 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6QTB31e-131A0A0D6QTB3_ARACU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP21711628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10800.11e-28bZIP family protein