PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_339377g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

ZF-HD

Protein Properties

Length: 125aa MW: 13549.4 Da PI: 5.5968

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_339377g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	55.6	1.2e-17	73	108	2	38
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegta 38 ++v Y eC+kNhAas+Gg+avDGC Efm+s g+egta MA_339377g0010 73 KSVSYGECRKNHAASIGGYAVDGCAEFMAS-GDEGTA 108 5799*************************9.666554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	8.0E-10	73	107	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	1.2E-15	75	108	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	17.63	77	125	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
MGLHRYRHVK DLAADELRSV FLHLRSEVPG TRSVQIQPQS IASAEEMGLS EIVQQIQAVS 60 AGTAREGDIA SRKSVSYGEC RKNHAASIGG YAVDGCAEFM ASGDEGTAXX XXXXXLAEMR 120 EQLQP

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT108234	1e-149	BT108234.1 Picea glauca clone GQ03118_L05 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A9NSF7	4e-46	A9NSF7_PICSI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP91	16	237

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28917.1	2e-14	mini zinc finger 2