PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_364562g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 234aa    MW: 25324.3 Da    PI: 7.8568
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_364562g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.9e-1560108355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ + +Wv+eI++p++   ++r+ lg+f+t+e+Aa+a++ a  +l+g
  MA_364562g0010  60 YRGVRRRS-WEKWVSEIKEPVK---KTRICLGSFDTPEMAARAYDVAEVYLKG 108
                     9****887.**********643...5*********************988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-2559118IPR001471AP2/ERF domain
PROSITE profilePS5103220.08659117IPR001471AP2/ERF domain
SMARTSM003809.0E-2759123IPR001471AP2/ERF domain
SuperFamilySSF541715.62E-1860118IPR016177DNA-binding domain
CDDcd000187.25E-2560119No hitNo description
PRINTSPR003672.4E-76071IPR001471AP2/ERF domain
PfamPF008471.2E-860106IPR001471AP2/ERF domain
PRINTSPR003672.4E-78298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MDKEASCLPK TMASLSTDTE LSSKSASSVK GGVKRIRTQD EPALSPPQET ALKQYPAGSY  60
RGVRRRSWEK WVSEIKEPVK KTRICLGSFD TPEMAARAYD VAEVYLKGKK HALLNFPELI  120
DHIPRPISLS PCHIQAAATE AAVAFYSASV GNSGWSSDSS KRTSRSPRNP PVGKEEASSS  180
SSSSNQLRTG IRSYFEPVSV ELSGQTDTSN SSSVCTPTEG IGESECVVVQ EDLF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ62e-83D5ABJ6_PICSI; Uncharacterized protein
STRINGBo9g170060.14e-31(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-32ERF family protein