PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_3734g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 344aa    MW: 39609.9 Da    PI: 5.0327
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_3734g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573331.6e-1011102597
        DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgke.psfskehdqkifelskkiWg 97 
                   + ws eDei+l  +++   a  g   + +++afye +k+ ++++ s+ q+ eK+rr++ +f + +++   ak  ++ +  ++ h+ + +++ k+iWg
  MA_3734g0010  11 KKWSAEDEISLANAVLASSA--G--GQVNMTAFYERAKETLQSE-SHGQIYEKMRRMRSRFWTIESQlrdAKIAEDfFPYRSMHEADLYKVWKQIWG 102
                   67*************98744..3..3468*************98.789*************9998886554433441457899*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.8E-1311102IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MPSEHAKDTA KKWSAEDEIS LANAVLASSA GGQVNMTAFY ERAKETLQSE SHGQIYEKMR  60
RMRSRFWTIE SQLRDAKIAE DFFPYRSMHE ADLYKVWKQI WGRHERRNEA AQDIEMEQNR  120
ELRSRSHARQ VHNGDVNEDR HESRTEAAHM NGEPRSHSHA MQRQNGEVTD DPPEEEEEEE  180
EEEHQQAEEE DNVVETAGKT PSRVACNHDE EFNLIQTEIK ALVCKVKNNV QTMLDDTEAK  240
MEGLIDSLFK RAVVAAQVQS LGSEVGIGSC LCSSLSRRMK ELECVRSVRE FPGLNEAEAK  300
ILQQKWRKHQ IEELRTFSGR LELLQEECKL CIKDLETANS SHNS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1223380.0BT122338.1 Picea sitchensis clone WS0443_M10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5A8570.0D5A857_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.29e-07DNA-binding storekeeper protein-related transcriptional regulator