PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_3758g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 257aa    MW: 28397.6 Da    PI: 6.7597
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_3758g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-1754105255
           AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                   +y+GVr ++ +g+Wv+eIr p      +++r++lg++ tae Aa+a++aa ++l+g
  MA_3758g0010  54 QYRGVRMRS-WGSWVSEIRAP---HhhQKTRIWLGSYSTAEAAARAYDAAVLCLKG 105
                   69****998.**********8...33456************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.8E-3053115IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-1954115IPR016177DNA-binding domain
SMARTSM003802.8E-3154119IPR001471AP2/ERF domain
PfamPF008476.9E-1054105IPR001471AP2/ERF domain
CDDcd000181.24E-1754115No hitNo description
PROSITE profilePS5103222.31354113IPR001471AP2/ERF domain
PRINTSPR003672.0E-95566IPR001471AP2/ERF domain
PRINTSPR003672.0E-97995IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MVCGGKQSER HQNMLIGYHQ DSRRECQVSS HVRPKADICK ASKKSSRGSE QLRQYRGVRM  60
RSWGSWVSEI RAPHHHQKTR IWLGSYSTAE AAARAYDAAV LCLKGSSARL NFPDSATIIK  120
PPQSCQTLLM SPRSIQKVAA AAAYGSSSAT IDLAGSNGVD CAVQSLQVSL DTNVKTEVGT  180
ETTPNTTSSN GDEGVTEEIS WLEQFLESPN RVNNYAYDQQ ILCCAMQSSD LSPLSNWVDE  240
SYGEDYQEDL CRLWSFT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1453113160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-14541131472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB2CSN51e-36B2CSN5_TAXCU; Transcription factor AP2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.11e-24ERF family protein