PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_381058g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 196aa    MW: 22160.3 Da    PI: 10.2804
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_381058g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY53.64.5e-175290239
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEE CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkve 39
                    +Dg++WrKY qK  + ++ prsYYrC++  gCpvkk+v 
  MA_381058g0010 52 NDGCRWRKYEQKATRHNPRPRSYYRCAMVpGCPVKKQVR 90
                    8**************************999*******96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-184090IPR003657WRKY domain
SuperFamilySSF1182905.1E-164392IPR003657WRKY domain
PROSITE profilePS5081118.0284689IPR003657WRKY domain
SMARTSM007741.8E-1151102IPR003657WRKY domain
PfamPF031062.0E-145290IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MQSEQIDNGI NLSMHYSPCD HVESPNKKHQ ALSKGSKRIA SVRTRSETSV INDGCRWRKY  60
EQKATRHNPR PRSYYRCAMV PGCPVKKQVR FRPFPFRFRH FPVALDLTDN RPNSGLEFRP  120
PNLEACSFQQ SKPLALFDQN QYSSTMQEIV TSMKADPNFT AALAVAIAGS LLNLGTSIQK  180
MPKFPPAKQC IDGSTQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1104111e-108BT110411.1 Picea glauca clone GQ03221_F16 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482CVK92e-55A0A482CVK9_9SPER; WRKY164
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-19WRKY DNA-binding protein 9