PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_446533g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 232aa    MW: 25789.8 Da    PI: 6.0395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_446533g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.6e-172878256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     y GVr +k +g+Wv+eIr+p   gk+ r++lg++ tae+Aa a++ a+ +l+g+
  MA_446533g0010 28 SYVGVRKRK-WGSWVSEIREP---GKKSRIWLGSYSTAEMAASAHDVAAFALRGH 78
                    79****999.**********8...557**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.9E-122778IPR001471AP2/ERF domain
CDDcd000181.67E-302786No hitNo description
SMARTSM003807.3E-342891IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-202886IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-292886IPR001471AP2/ERF domain
PROSITE profilePS5103221.8522885IPR001471AP2/ERF domain
PRINTSPR003679.3E-82940IPR001471AP2/ERF domain
PRINTSPR003679.3E-85167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MSQETDRSSR NSKSKTRQKE RSAASYPSYV GVRKRKWGSW VSEIREPGKK SRIWLGSYST  60
AEMAASAHDV AAFALRGHSA ILNFPHFLQY LPLPPTSSPK DIKDTAAAAA EKIRLILGQS  120
FQQCRIPDDV INEGARGKGT DGSSSIAENF YPTGQFAVSI LSDELTSKQY VGKVHESAAL  180
QMSESEDRLI MDSASSLMNI DFDLPTSPDA HIDKQVLISE QEEEFFIWDF SF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-162386973Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-35ERF family protein