PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_476980g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 165aa    MW: 18730.5 Da    PI: 10.7255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_476980g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.39.8e-07107133531
                     HHHHHHHHHHHHHHHHHHHHCTSCCC. CS
             HLH   5 hnerErrRRdriNsafeeLrellPkas 31 
                     h  +Er+RR+++ + f+ Lr l+P ++
  MA_476980g0010 107 HVVAERKRRAKMGDVFSALRALVPVNP 133
                     8899********************954 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.05E-7102136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.693102165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-6106133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.17E-5106135No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MGIGNSQPAV QLEESIISGP AEEINGNWSR LGFSFNHKRN SSFVGWKSIN PVLPRFCKPQ  60
NYSSLQKRCF RFLNVIKNHK ILGPLSSNEE SSGAVPSNNY NKLAIHHVVA ERKRRAKMGD  120
VFSALRALVP VNPKDNEFEP CWVHEKHRRS SLRDYKTMKG KLSLV