PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_493100g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 193aa    MW: 21404.1 Da    PI: 9.248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_493100g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.39.3e-096332956
             AP2 29 krfslgkfgtaeeAakaaiaarkklege 56
                    ++++lg++ t+e+Aa+a++aa+ +l+g+
  MA_493100g0010  6 QKIWLGSHKTPEQAARAYDAAMYCLRGP 33
                    789**********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.721140IPR001471AP2/ERF domain
SMARTSM003807.4E-5246IPR001471AP2/ERF domain
CDDcd000181.61E-15242No hitNo description
Gene3DG3DSA:3.30.730.101.9E-15242IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-10442IPR016177DNA-binding domain
PfamPF008471.0E-4532IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MPRSRQKIWL GSHKTPEQAA RAYDAAMYCL RGPNAKFNFP DSVPNIPSAS SLSPKQIQHA  60
ALKYALGQTP SSLPSLNNNK EEPASPSQSS SVPETNLSTE KQQISDEWQD LAPWSSLFAA  120
SSSSSRRATS RQTCGTSKIF EFLEQTNLPF LVGFEHATCF WPTPNVLHDL AGMRQVFKFP  180
HAFLIQNFVG TMK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0872210.0EF087221.1 Picea sitchensis clone WS02732_A16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026430012.13e-24ethylene-responsive transcription factor ERF017-like
TrEMBLB8LN816e-71B8LN81_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-24ERF family protein