PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_496691g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 193aa    MW: 21620.3 Da    PI: 7.0163
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_496691g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY45.12.1e-141201631158
                     EEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY  11 GqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     G+K vk+s++pr    C+ ++C vkk ver+a+d+ +v++tY g+Hnh
  MA_496691g0010 120 GKKLVKNSPNPR----CSDSSCDVKKTVERDAHDKGIVITTYLGKHNH 163
                     9**********6....******************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.352111166IPR003657WRKY domain
SuperFamilySSF1182905.23E-12118166IPR003657WRKY domain
PfamPF031067.0E-9120163IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-13120166IPR003657WRKY domain
SMARTSM007745.7E-10120165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MANFDSKVGH FEAAIKAFSK EQSQLLQGPN SLQHMKQGTK PFEPLDFLVS EEEFDHSCTS  60
DDAGDKGLRS DHNSSVIQTH EPLQTMSPEI SSRKRKAERA LKYAFLTRSE SDXXXXXXXG  120
KKLVKNSPNP RCSDSSCDVK KTVERDAHDK GIVITTYLGK HNHGSPSVIY YIGLPRQTTS  180
SPIEGFYEGF EQH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6R4C92e-29A0A0D6R4C9_ARACU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21900.12e-15WRKY DNA-binding protein 59