PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_5629699g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 189aa    MW: 21120.6 Da    PI: 7.5116
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_5629699g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.7e-172675255
              AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     +++GVr++  +g+WvAeIr        +  r++lg++ tae+Aa+a++aa  +l+g
  MA_5629699g0010 26 RFRGVRRRT-WGKWVAEIRMlR-----CrSRVWLGSYRTAEQAARAYDAASFCLRG 75
                     69****877.**********76.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.8E-122675IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-282685IPR001471AP2/ERF domain
SMARTSM003802.5E-332689IPR001471AP2/ERF domain
PROSITE profilePS5103221.9572683IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-202684IPR016177DNA-binding domain
PRINTSPR003676.8E-102738IPR001471AP2/ERF domain
CDDcd000188.53E-223485No hitNo description
PRINTSPR003676.8E-104965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MKKEVDQAIM VSRSREAEAE ELRSRRFRGV RRRTWGKWVA EIRMLRCRSR VWLGSYRTAE  60
QAARAYDAAS FCLRGPAAFL NFPESPPAEF LPYPLRPLHD IHLSPQQIRT IAANYATMTP  120
SSTSISTSTS GLPPQQSNLM DNSALEEAGG EGSASVTTHV DSTKSAPRNM IFPNLNDTLD  180
EDSEDSSER
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1826831472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1223930.0BT122393.1 Picea sitchensis clone WS0451_B11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5A8A71e-136D5A8A7_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.19e-24ERF family protein