PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_5730259g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 182aa    MW: 19956.2 Da    PI: 10.0746
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_5730259g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-1786137256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +y+GVr +  +g+++AeIrdp +  k +r++lg+f taeeAa a+++a+ +++g+
  MA_5730259g0010  86 HYRGVRKRA-WGKFAAEIRDPAK--KGARVWLGTFITAEEAALAYDRAAFRIRGA 137
                      7*****887.**********954..34*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-3085144IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-2186145IPR016177DNA-binding domain
SMARTSM003801.2E-3486150IPR001471AP2/ERF domain
CDDcd000181.69E-2786144No hitNo description
PfamPF008474.3E-1186136IPR001471AP2/ERF domain
PROSITE profilePS5103223.70986144IPR001471AP2/ERF domain
PRINTSPR003675.0E-108798IPR001471AP2/ERF domain
PRINTSPR003675.0E-10110126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
SLSFSPTVTW DYIHATITAT ATASGSCLNT ATATASGSEH NENEFTQQHS SSSSVSTVTR  60
REKAVDVKVK PLPREEENGE MRKDRHYRGV RKRAWGKFAA EIRDPAKKGA RVWLGTFITA  120
EEAALAYDRA AFRIRGARAL LNFPLAFASN SENGSAVGQR EKRGREEMAE ECRKSCVGGS  180
RS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-3383145264ATERF1
3gcc_A2e-3383145264ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012090506.11e-34ethylene-responsive transcription factor 2
TrEMBLA9NMA34e-50A9NMA3_PICSI; Uncharacterized protein
STRINGXP_008809462.17e-34(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.15e-25ethylene responsive element binding factor 2