PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_58867g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

NAC

Protein Properties

Length: 304aa MW: 35067 Da PI: 6.5102

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_58867g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.9	1.5e-43	19	145	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 pGfrF Pt+eel+++yLk++v+g + l+l+ +i+++d+y+++Pw+Lp +++ ++++w+fF++rd+k+a +r++r t sgyWkatg+d++v + MA_58867g0010 19 PGFRFYPTEEELLCFYLKNRVQGCHqLNLDIIIPTLDLYQYDPWELPgLAHDDGDRQWFFFVPRDHKKAC-SRPSRLTVSGYWKATGSDRAVRNDL 113 9*******************9885777667***********657777999******9975.8******************99 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfykg+ap g+ktdW+m+eyr+ MA_58867g0010 114 LQCIGLKKILVFYKGKAPCGQKTDWIMNEYRM 145 999*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	49.628	17	166	IPR003441	NAC domain
SuperFamily	SSF101941	1.31E-46	17	166	IPR003441	NAC domain
Pfam	PF02365	4.5E-23	19	145	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MQEATYNDVK LQTELMDLPG FRFYPTEEEL LCFYLKNRVQ GCHQLNLDII IPTLDLYQYD 60 PWELPGLAHD DGDRQWFFFV PRDHKKACSR PSRLTVSGYW KATGSDRAVR NDLLQCIGLK 120 KILVFYKGKA PCGQKTDWIM NEYRMPDFRS SATKKTDIVL CRIYRKAVSQ RSMEQRAKPD 180 YFEKEEPVVS GDEYDEKSDS VTLNGSSQLS NPVTKSQVCS LHYSENQEGV NSFHQGKTNK 240 EASLFECLEP IIYSEETMVL KTPKTFKPMQ LELPKLSMDS LFSQPISTPY SLLPTPSPFH 300 IPLL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-44	13	169	13	168	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-44	13	169	13	168	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-44	13	169	13	168	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-44	13	169	13	168	NO APICAL MERISTEM PROTEIN
4dul_A	4e-44	13	169	13	168	NAC domain-containing protein 19
4dul_B	4e-44	13	169	13	168	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008791987.1	7e-62	NAC domain-containing protein 22-like
Refseq	XP_010943933.2	3e-61	NAC domain-containing protein 22
Swissprot	Q10S65	3e-57	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A075M5N5	1e-176	A0A075M5N5_9SPER; NAC domain protein
STRING	XP_008791987.1	3e-61	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP17	15	800

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	5e-58	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]