PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_6305g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 147aa    MW: 16663.2 Da    PI: 10.4606
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_6305g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.9e-173887255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++G+r +k +g+Wv+eIr p++   + r++lg+++t+e+Aa+a++ a  +l+g
  MA_6305g0010 38 EIRGIRMRK-WGKWVSEIRMPNS---KGRIWLGSYDTPEKAARAYDFAVYCLRG 87
                  68*****99.**********832...49********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.3E-52340IPR001471AP2/ERF domain
CDDcd000184.33E-273797No hitNo description
PROSITE profilePS5103221.2463895IPR001471AP2/ERF domain
SMARTSM003802.4E-3238101IPR001471AP2/ERF domain
PfamPF008472.9E-103887IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-203897IPR016177DNA-binding domain
PRINTSPR003671.4E-83950IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-284196IPR001471AP2/ERF domain
PRINTSPR003671.4E-86177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MAKPSPYQNG HGRSENHSLK LPHFMGIRMR KWGKWVSEIR GIRMRKWGKW VSEIRMPNSK  60
GRIWLGSYDT PEKAARAYDF AVYCLRGSKA KINFPYSPPE FPCASSLSPP QIQAGAAKFA  120
AEDFCLPLEK DAPSSSTIYL FGSVIRH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1540971674Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261769.12e-37PREDICTED: ethylene-responsive transcription factor ERF017-like
SwissprotQ9C5911e-35ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLB8LPP62e-50B8LPP6_PICSI; Uncharacterized protein
STRINGXP_010261769.16e-37(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.16e-38ERF family protein