PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_647924g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 235aa    MW: 26198.5 Da    PI: 4.9792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_647924g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.7e-172878256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     y GVr +k +grWv+eIr+p++   + r++lg++ t+e+Aa a++ a+ +l+g+
  MA_647924g0010 28 FYIGVRKRK-WGRWVSEIREPRQ---QSRIWLGSYSTPEMAACAHDVAAFALKGH 78
                    699***999.**********943...4*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-282891IPR001471AP2/ERF domain
SuperFamilySSF541715.3E-202886IPR016177DNA-binding domain
PROSITE profilePS5103221.6142885IPR001471AP2/ERF domain
CDDcd000181.25E-282986No hitNo description
PfamPF008477.6E-112978IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-282986IPR001471AP2/ERF domain
PRINTSPR003673.0E-102940IPR001471AP2/ERF domain
PRINTSPR003673.0E-106787IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MSQGTDCSGG NMESKTWQKK RSAASHPFYI GVRKRKWGRW VSEIREPRQQ SRIWLGSYST  60
PEMAACAHDV AAFALKGHSA ILNFPDFLQF LPCPPTSSPT DIKAAAAAAA AKINLMLSRS  120
PHPIRNRAEI INVRIDHNAT DEASLVTANI NPIAEWDGGS ISSEELRSKH SVISPVVEMF  180
DQSDALQKCD NEDQLIMDSA NWLMNIEYDL PTARIDEQPV TSEEVEELLL WDFSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-162385972Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11835KKRSAASHPFYIGVRKRK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.17e-35ERF family protein