PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_65877g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 252aa    MW: 27588.7 Da    PI: 5.2396
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_65877g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-184796255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr+++ +g Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+ +l+g
  MA_65877g0010 47 EYRGVRRRS-WGTWVSEIREPKK---KTRIWLGSFNTPEMAARAYDVAAIYLKG 96
                   69****887.**********854...6***********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-124696IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-184798IPR016177DNA-binding domain
SMARTSM003801.1E-2747109IPR001471AP2/ERF domain
PROSITE profilePS5103220.65347107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-2747100IPR001471AP2/ERF domain
PRINTSPR003672.0E-94859IPR001471AP2/ERF domain
CDDcd000185.41E-2648100No hitNo description
PRINTSPR003672.0E-97086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MVTSSTDTEA SNKSASTTNG GIETIRTQDE AAPSPPQESR LKMQYPEYRG VRRRSWGTWV  60
SEIREPKKKT RIWLGSFNTP EMAARAYDVA AIYLKGKKRC PQPISPSPRH IQAAAAEAAV  120
AFNFASERAR SSGRSSDVNK QERRRPRNPP VSNKHAARPS SDQVSAVIGS DLELEAASVE  180
LPGQMNASNS SSVCPTTEGL GESVIEDDLF ESSNLYANLA EALLLPPPPL FSIPEVEVEE  240
QKLEEGVLWS DF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ61e-79D5ABJ6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-26ERF family protein