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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | MA_69506g0010 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family | bHLH | ||||||||
| Protein Properties | Length: 126aa MW: 14745 Da PI: 10.1281 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 23.5 | 1e-07 | 88 | 122 | 5 | 41 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKa 41
n+rE RR +++ +++Lr+llP + p+kKls
MA_69506g0010 88 YNAREPHRRIKLKVLYSQLRSLLPDlN---PKKKLSIP 122
69***********************55...*****965 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:4.10.280.10 | 0.001 | 76 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| SuperFamily | SSF47459 | 4.22E-6 | 83 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| PROSITE profile | PS50888 | 9.604 | 83 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| Pfam | PF00010 | 1.1E-4 | 88 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| CDD | cd00083 | 1.84E-4 | 89 | 120 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0046983 | Molecular Function | protein dimerization activity | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 126 aa Download sequence Send to blast |
MGSLLLHSPW EALHEPAIIT PPRCWQFDHQ QLPTTDNVIL DEYTRSQFGF MHKKYYHHQS 60 PWILPVKSSE LQPNGKEYSG PITKKAFYNA REPHRRIKLK VLYSQLRSLL PDLNPKKKLS 120 IPNTVS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G56970.1 | 3e-09 | bHLH family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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