PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_7105735g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family MYB_related
Protein Properties Length: 148aa    MW: 16636.7 Da    PI: 7.9175
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_7105735g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73e-091232447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Iar+++ gRt++++k++w +y
  MA_7105735g0010  1 WSLIARRLP-GRTDNDIKNYWKTY 23
                     *********.************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001678.82E-8124No hitNo description
SuperFamilySSF466891.79E-7133IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.5E-12140IPR009057Homeodomain-like
PROSITE profilePS5129418.126128IPR017930Myb domain
PfamPF002498.2E-7123IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
WSLIARRLPG RTDNDIKNYW KTYIKKKLLK RGLDHQFHRP LCSPHNSNTT RSSRPAPEHQ  60
IPAFQSPRTP EIADFFQYEL SGCSPIEPAA SKDEEHPDIN LDLCISLPLH STPAANKASS  120
VDGTVDSKSY YDHGLCCQIG LQVNYGGF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ4699230.0FJ469923.1 Picea glauca R2R3-MYB transcription factor MYB17 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLC0JTD64e-99C0JTD6_PICGL; R2R3-MYB transcription factor MYB17
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5171784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-18myb domain protein 4