PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_74014g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Dof

Protein Properties

Length: 391aa MW: 43312.5 Da PI: 6.1645

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_74014g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	39	99	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+++ MA_74014g0010 39 TEQPLKCPRCDSANTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRAK 99 67899*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-27	41	97	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-33	41	97	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.879	43	97	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	45	81	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence Send to blast
MDSADWTQSF LQNSALKLSE DLMSCPRPPM LERRIKPQTE QPLKCPRCDS ANTKFCYYNN 60 YNLSQPRHFC KTCRRYWTKG GALRNVPVGG GCRKNKRAKR AIDHPVSAQN EASTSAAPGN 120 EVPDRSAFEP TLPPSSKSIY YGGENMNLTG LPFTRIQQDR AALAHCNSSS FLGMSCGTQS 180 ASLEPHLSAL NTFNSFKSNN PGLDFSSLST DQNSLFESSQ PQLSRAMASA LFAMPMVPGL 240 DDPADFHWKL QQQQQQKLSF PFGDGQIDNG PGNERHDFLT YEDSSKNDLK PEVVTKLPSS 300 SVKVEEDQNA LASDWQVPAS EPLFAGDSNS YWNGGAWPDI TTYGLSDSCR YFFFYGVFGM 360 AVAAELSSIC HLCRFIGDGA VPFLLYYLLL E

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence Send to blast

MDSADWTQSF LQNSALKLSE DLMSCPRPPM LERRIKPQTE QPLKCPRCDS ANTKFCYYNN  60
YNLSQPRHFC KTCRRYWTKG GALRNVPVGG GCRKNKRAKR AIDHPVSAQN EASTSAAPGN  120
EVPDRSAFEP TLPPSSKSIY YGGENMNLTG LPFTRIQQDR AALAHCNSSS FLGMSCGTQS  180
ASLEPHLSAL NTFNSFKSNN PGLDFSSLST DQNSLFESSQ PQLSRAMASA LFAMPMVPGL  240
DDPADFHWKL QQQQQQKLSF PFGDGQIDNG PGNERHDFLT YEDSSKNDLK PEVVTKLPSS  300
SVKVEEDQNA LASDWQVPAS EPLFAGDSNS YWNGGAWPDI TTYGLSDSCR YFFFYGVFGM  360
AVAAELSSIC HLCRFIGDGA VPFLLYYLLL E

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KC688677	0.0	KC688677.1 Pinus pinaster Dof2 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	T2B8A7	0.0	T2B8A7_PINPS; Dof2

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP38	17	445

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-34	TARGET OF MONOPTEROS 6