PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_7513437g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 203aa    MW: 23138.5 Da    PI: 6.7126
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_7513437g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.4e-29144200258
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                      +Dgy+WrKYG+K vk+s++pr+Y+rC+ ++C vkk ver+a+d+ +v++tY+g+Hnh
  MA_7513437g0010 144 EDGYKWRKYGKKLVKNSPNPRNYFRCSDSSCDVKKTVERDAHDNGIVITTYQGKHNH 200
                      8******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.2E-31131202IPR003657WRKY domain
SuperFamilySSF1182902.09E-26135203IPR003657WRKY domain
PROSITE profilePS5081129.735138203IPR003657WRKY domain
SMARTSM007742.1E-31143202IPR003657WRKY domain
PfamPF031062.6E-23144200IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MTNFDSRLGH FEAAINAFSK EQSQLLQRPN SLQHMNEGTN PFEPLDFLVF EEEFDHSCTS  60
DDAGEQAYSF NTVKLGPSTP FEYARSFSSN RPCSQGLRSD HNSCVIETHE PLQTMSPDIS  120
SRKRNAERAL KYAFLTRSES DILEDGYKWR KYGKKLVKNS PNPRNYFRCS DSSCDVKKTV  180
ERDAHDNGIV ITTYQGKHNH GSP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-24136203774WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022927982.14e-33probable WRKY transcription factor 51
RefseqXP_023512174.14e-33probable WRKY transcription factor 51
TrEMBLA0A0D6R4C92e-41A0A0D6R4C9_ARACU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-30WRKY DNA-binding protein 50