PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_780487g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 73aa    MW: 8417.88 Da    PI: 10.2363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_780487g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.71e-10646140
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiy 40
                    lp GfrFhPtdeel+ +yLk k++  + +  ++ +++   +
  MA_780487g0010  6 LPLGFRFHPTDEELILNYLKDKLKMASKHQrSRLFPRSTFT 46
                    699*******************9987744303335555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-9332IPR003441NAC domain
PROSITE profilePS5100511.422673IPR003441NAC domain
PfamPF023657.6E-7740IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    Send to blast
METFALPLGF RFHPTDEELI LNYLKDKLKM ASKHQRSRLF PRSTFTYASP GTCLINPSFR  60
TLTWSGISLV LLI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0848194e-82EF084819.1 Picea sitchensis clone WS02811_I19 unknown mRNA.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.31e-08NAC transcription factor-like 9