PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_81979g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 201aa    MW: 22549.9 Da    PI: 4.5308
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_81979g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.5e-111658955
            AP2  9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +k +g+Wv+e r p++   r + +lg++ +a++Aa+a++aa  +l+g
  MA_81979g0010 16 RK-WGSWVSETRMPRS---REKLWLGSYPSAQQAARAYDAAVYCLRG 58
                   55.*******999844...4*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.622566IPR001471AP2/ERF domain
PRINTSPR003671.1E-51021IPR001471AP2/ERF domain
SMARTSM003801.3E-171372IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-141468IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-221568IPR001471AP2/ERF domain
PfamPF008471.2E-61658IPR001471AP2/ERF domain
CDDcd000181.32E-191668No hitNo description
PRINTSPR003671.1E-54868IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MGELGIRNSN AQISLRKWGS WVSETRMPRS REKLWLGSYP SAQQAARAYD AAVYCLRGPN  60
AKFNFPDSLP NIPSASSLSR RQIQVAAAKY AFDQLPSSPS FRQDINNKAT EEAASPSRSG  120
SVSETELSSD SHQISNEEEL DLWECLFEVS DSNARCLGLN LERMPSIEEV SALEFFHSTS  180
QEQQEEGHMN ILIDPTELWN F
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1136562e-55BT113656.1 Picea glauca clone GQ03416_G18 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389872.15e-34PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLD5ADJ94e-68D5ADJ9_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.13e-25ERF family protein