PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8865g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 501aa    MW: 55553.2 Da    PI: 7.3675
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8865g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.3e-31258311255
       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                   pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  MA_8865g0010 258 PRMRWTSTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 311
                   9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.05E-15255312IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-28256311IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-23258311IPR006447Myb domain, plants
PfamPF002491.0E-6259310IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MLQEEIINDI SGPSGVITRC GGDLDLSLQI RPPNSKPSAT SSGGAEGRDL IGLDLWRRRN  60
TVKSNSTSLT ESSVITNLSS GSDRSQEDAT SLNFCFPNPG GLIDYNQLES ESRPTGLEDE  120
ARGLGFDHTT SARHSLSLVH GIGPIWINNP LKTENSGVVL VDKSLGFPGF REDSEPRIGD  180
LACRYIERLG RGIENQHREA LSRLLEADQN INRNSEIVSS ENCGLIPSSA VAPSPAEPNA  240
FRSRFMSKIP SKRSMRAPRM RWTSTLHAHF VHAVELLGGH ERATPKSVLE LMNVKDLTLA  300
HVKSHLQMYR TLKTTDKPAG PCDVFEVSSM QKSEDFMATY RVSSKQYNKS LSCNGEMDLG  360
PIQVTARQSA SPFNENQQKH QQNYYQNLQN NISSRSRNLF KDWQLPSSVN SLCQPRTRSS  420
IDQNEVELSG YQGNHHYIGR MEQNSLPQFP NSTSAIKPQS VSSQLINPKL ASFPDLDITL  480
GRPGWKLEHS DCPQELPLLK C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-17259313357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-17259313357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-17259313357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-17259313357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-17259313458Protein PHOSPHATE STARVATION RESPONSE 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00174DAPTransfer from AT1G32240Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1231840.0BT123184.1 Picea sitchensis clone WS0467_N16 unknown mRNA.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5701580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.17e-43G2-like family protein