PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_88g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 188aa    MW: 20755.4 Da    PI: 8.3155
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_88g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-172372255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++kG+r +k +g+Wv+eIr p+    +  r++lg+++t+e+Aa+a++ a  +l+g
  MA_88g0020 23 KFKGIRKRK-WGKWVSEIRMPK----CsGRIWLGSYDTPEKAARAYDFALYCLRG 72
                79****999.**********83....67***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.8E-282382IPR001471AP2/ERF domain
SMARTSM003807.6E-342386IPR001471AP2/ERF domain
CDDcd000183.91E-292382No hitNo description
PROSITE profilePS5103221.7732380IPR001471AP2/ERF domain
PfamPF008474.0E-102372IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-192382IPR016177DNA-binding domain
PRINTSPR003678.0E-92435IPR001471AP2/ERF domain
PRINTSPR003678.0E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MAKPSQNQNR YSSPESHSLK SGKFKGIRKR KWGKWVSEIR MPKCSGRIWL GSYDTPEKAA  60
RAYDFALYCL RGSKAKLNFP HSPPKVPCAS SLSPPQIQAA AAKFAAEEFR LPSENGAASS  120
SSGLEVECNI AGRQITAEQG PAFRDSVPLG SLESDGSLNV EDIPLLDVSM EDFGILFQRT  180
EDWEPWVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1820811173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LPP62e-74B8LPP6_PICSI; Uncharacterized protein
STRINGAquca_076_00039.12e-38(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.12e-35ERF family protein