PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_891091g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 180aa    MW: 20043.2 Da    PI: 6.9698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_891091g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.56.1e-17119170256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr +  +g++ AeIrdp +  k +r++lg+f taeeAa a+++a+ +++g+
  MA_891091g0010 119 HYRGVRKRA-WGKFSAEIRDPAK--KGARVWLGTFITAEEAALAHDRAAFRIRGA 170
                     7*****887.**********954..34*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.2E-30118177IPR001471AP2/ERF domain
CDDcd000183.67E-28119177No hitNo description
SMARTSM003803.7E-29119180IPR001471AP2/ERF domain
PfamPF008478.1E-11119169IPR001471AP2/ERF domain
PROSITE profilePS5103223.103119177IPR001471AP2/ERF domain
SuperFamilySSF541715.75E-21119178IPR016177DNA-binding domain
PRINTSPR003674.9E-10120131IPR001471AP2/ERF domain
PRINTSPR003674.9E-10143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MEITAGEGLN INMLELIRHH LLEVEDEMDI IDVHHAGGND PSSSSSSLSF SPTVTWDYIH  60
ATATASGSCQ NSGSRSTSEH NENEFIQQYS SSSSLSTVTR REKPQPREEE NGEMRKGRHY  120
RGVRKRAWGK FSAEIRDPAK KGARVWLGTF ITAEEAALAH DRAAFRIRGA RALLNFPLAF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-33116178264ATERF1
3gcc_A3e-33116178264ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NMA37e-54A9NMA3_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-25ethylene responsive element binding factor 1