PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_924346g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 254aa    MW: 27946.8 Da    PI: 5.6726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_924346g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.17.7e-122864242
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeA 42
                     y GVr +k +g+Wv+eIr+p   gk+ +++lg++ t+e+A
  MA_924346g0010 28 SYIGVRKRK-WGSWVSEIREP---GKQSKIWLGSYSTPEMA 64
                    699***999.**********8...556*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.77E-2327108No hitNo description
PfamPF008471.9E-62764IPR001471AP2/ERF domain
PROSITE profilePS5103216.80528107IPR001471AP2/ERF domain
SMARTSM003801.0E-1828113IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-102866IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-152864IPR001471AP2/ERF domain
PRINTSPR003674.1E-102940IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-879108IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-579108IPR016177DNA-binding domain
PRINTSPR003674.1E-1089109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MSQGADCTSR NSKPETWQKK KSAASYPSYI GVRKRKWGSW VSEIREPGKQ SKIWLGSYST  60
PEMAXXXXXX XXXXXXXXSY STPEMAASAH DVAAFALRGH SALLNFPHFI QYLPRPPTSS  120
PKDIKATAAA AAAKVRLILG QSFEQSRNPD AIINEGARGK GTDESSSIAA NFNPTGQLAG  180
SILSDELTSK QYVGRVHESA SLQMSENEDQ LIMDSASSLM NIDFDLPTSP NAHIDKQVLI  240
SEEEEEFLIW DFPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11835KKKSAASYPSYIGVRKRK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16750.12e-28ERF family protein