PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_926192g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family MYB_related
Protein Properties Length: 91aa    MW: 10148.5 Da    PI: 7.3452
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_926192g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.8e-084178544
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     ++eE++l+ +++k+lG + W++Ia +++  R  +++ ++ 
   MA_926192g0010 41 SAEEEDLINRLHKLLGDR-WALIAGRLP-WRRVEEIENYC 78
                     79**************99.*********.*****999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007173.8E-43684IPR001005SANT/Myb domain
SuperFamilySSF466891.33E-54077IPR009057Homeodomain-like
CDDcd001672.24E-54180No hitNo description
PfamPF002494.3E-74179IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.1E-94177IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MNMDSKQGFS NVTGPGGGII SLRESNVEYC KKSGSAAHDI SAEEEDLINR LHKLLGDRWA  60
LIAGRLPWRR VEEIENYCKM RYIVTASSSC S
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1110332e-78BT111033.1 Picea glauca clone GQ03231_J08 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NQX06e-18A9NQX0_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4207823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-14MYB_related family protein