PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_9321671g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 226aa    MW: 25481.3 Da    PI: 6.2492
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_9321671g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-182675255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr+++ +grWv+eIr p   g ++r++lg+++ +e+Aa+a++ a+ +l+g
  MA_9321671g0010 26 KYRGVRRRR-WGRWVSEIRQP---GTKTRIWLGSYDKPEMAARAYDVAAVSLKG 75
                     8*****777.**********8...325**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.1E-292584IPR001471AP2/ERF domain
SMARTSM003805.4E-342689IPR001471AP2/ERF domain
PROSITE profilePS5103222.7872683IPR001471AP2/ERF domain
PfamPF008476.0E-122674IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-202684IPR016177DNA-binding domain
PRINTSPR003675.8E-92738IPR001471AP2/ERF domain
CDDcd000181.71E-163485No hitNo description
PRINTSPR003675.8E-94965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MDTFSNKVDF NGRKRNRSEE ETTSRKYRGV RRRRWGRWVS EIRQPGTKTR IWLGSYDKPE  60
MAARAYDVAA VSLKGKSALP NFPHLIHTLP RPASLDPTDI QYAAAQAALS FPQHSHPETD  120
CPSKCPNHSS TTPINVGGSM EAAAANDEGL EASSVNLRIR TGRDQRYSLF DEGLQQFDSP  180
NLVMNLAEAL LLTPPRLNDL EAEDYDDDVV DWMDQHAGFG FLWNNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1526841473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11233RKRNRSEEETTSRKYRGVRRRR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1152695e-44FJ115269.1 Pinus taeda isolate 4475 anonymous locus UMN_5121_02 genomic sequence.
GenBankFJ1152785e-44FJ115278.1 Pinus taeda isolate 4468 anonymous locus UMN_5121_02 genomic sequence.
GenBankFJ1152805e-44FJ115280.1 Pinus taeda isolate 4459 anonymous locus UMN_5121_02 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024453102.13e-35ethylene-responsive transcription factor ERF022
RefseqXP_024454096.13e-35ethylene-responsive transcription factor ERF022-like
TrEMBLA0A0D6R4W16e-37A0A0D6R4W1_ARACU; Uncharacterized protein
STRINGPOPTR_0003s05300.11e-34(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.14e-24ERF family protein