PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_937875g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 505aa MW: 57713.3 Da PI: 6.4073

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_937875g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.1e-32	90	143	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++F++ave+LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+ MA_937875g0010 90 PRLRWTPDLHHCFMNAVERLGGQDRATPKLVLQLMDVKGLTIAHVKSHLQMYRS 143 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.653	86	146	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	7.1E-32	86	145	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.48E-15	88	146	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.5E-23	90	144	IPR006447	Myb domain, plants
Pfam	PF00249	4.0E-8	91	142	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence Send to blast
MEVQGEQSSS NDGIELNSRK RSASSEDLEP PAKVFGGENT NPNTAKSSSN STVEGSEGKN 60 XXQSSSNSTV EGSEGKNGGT ARQYVRSKMP RLRWTPDLHH CFMNAVERLG GQDRATPKLV 120 LQLMDVKGLT IAHVKSHLQM YRSMKNDENG QGIGSQSEKH MEGRDHLPDC YSHSRTGLQQ 180 FENRRFLVND DYESAQYYNL FNRPTMQTFD HRLTTRYDRN PWAAHEDWLS RSYQIQLTNY 240 DNARGLYGWT SGNNLDWKNK REKALPVTRR DYKSELLGST IDPQLSVQWG KKQEEEKERT 300 CNLPEEDYFR PDFTGDLNTI SDQPTKHIRQ VEVDWSRWKH GREATVDSTN LGHGRIGTSC 360 IGLTDRNLQT APVKCNEPIT IDLEQESLPL QLQLQRELAQ QQLPRTLESP ESDYVRPERK 420 KKPKEPNLQL MLKHADDQDQ SWSEEEVDSS LSLSLFSKYQ EKETNSLKLA TSREGKPEPK 480 PFLQQANTDT HTPRGISTLD LTMSI

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence Send to blast

MEVQGEQSSS NDGIELNSRK RSASSEDLEP PAKVFGGENT NPNTAKSSSN STVEGSEGKN  60
XXQSSSNSTV EGSEGKNGGT ARQYVRSKMP RLRWTPDLHH CFMNAVERLG GQDRATPKLV  120
LQLMDVKGLT IAHVKSHLQM YRSMKNDENG QGIGSQSEKH MEGRDHLPDC YSHSRTGLQQ  180
FENRRFLVND DYESAQYYNL FNRPTMQTFD HRLTTRYDRN PWAAHEDWLS RSYQIQLTNY  240
DNARGLYGWT SGNNLDWKNK REKALPVTRR DYKSELLGST IDPQLSVQWG KKQEEEKERT  300
CNLPEEDYFR PDFTGDLNTI SDQPTKHIRQ VEVDWSRWKH GREATVDSTN LGHGRIGTSC  360
IGLTDRNLQT APVKCNEPIT IDLEQESLPL QLQLQRELAQ QQLPRTLESP ESDYVRPERK  420
KKPKEPNLQL MLKHADDQDQ SWSEEEVDSS LSLSLFSKYQ EKETNSLKLA TSREGKPEPK  480
PFLQQANTDT HTPRGISTLD LTMSI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	4e-17	91	145	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-17	91	145	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-17	91	145	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-17	91	145	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-17	91	145	4	58	Protein PHOSPHATE STARVATION RESPONSE 1

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00301	DAP	Transfer from AT2G40260	Download

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP285	15	123

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	1e-35	G2-like family protein