PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_9399348g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 225aa    MW: 25078.2 Da    PI: 9.1774
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_9399348g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.17.9e-13104148448
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      ++++rr+ +NRe+ArrsR+RK+  ++eL+  v+ L ae  +  ++
  MA_9399348g0010 104 VRKQRRMLSNRESARRSRLRKQHHLDELRAQVAHLRAEHGEIVDK 148
                      689**********************************98766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-13101165IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.657103145IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-11104159No hitNo description
PfamPF001706.0E-10104144IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.3E-9105177No hitNo description
CDDcd147023.96E-20106157No hitNo description
PROSITE patternPS000360108123IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MVTSQSYQMD IPKNFVVPIR PAQFSREIYD MGSAQYNNMN IAAHLNASGA KTAVPTMKSM  60
RVSVDKRCPT QDSLYSPGSN GEGISQSRSI SASDEAEVQQ VIDVRKQRRM LSNRESARRS  120
RLRKQHHLDE LRAQVAHLRA EHGEIVDKFN IASQHYAHII EENCLLRSQA QELSRKLQIL  180
QHTINAQSHG GFKTTGIETG NCSAAHLSLE SGTIANSFIS SDLLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRSRLRK
2117124RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLH9VT379e-62H9VT37_PINTA; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-27basic leucine-zipper 42