PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_94412g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

GeBP

Protein Properties

Length: 466aa MW: 52795.5 Da PI: 6.0058

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_94412g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	32.3	2.8e-10	133	224	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgke.psfskehdqkifelskkiW 96 + ws eDei+l +++ a g + +++afye +k+ ++++ s+ q+ eK+rr++ +f + +++ ak ++ + ++ h+ + +++ k+iW MA_94412g0010 133 KKWSAEDEISLANAVLASSA--G--GQVNMTAFYERAKETLQSE-SHGQIYEKMRRMRSRFWTIESQlrdAKIAEDfFPYRSMHEADLYKVWKQIW 223 67***********98744..3..3468*********98.789*********9998886554433441457899*********** PP DUF573 97 g 97 g MA_94412g0010 224 G 224 8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.1E-13	133	224	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence Send to blast
MSSSALPSSS DDGDARSHAK PNSTPPTKSS AASSDSEPKT PRRSSVMKKS RDGSRPDTRV 60 WPKQSRDRLE AKLPASKKKK NSRKTGVSGN KSQIDIEELL AQTYPKEPSV LGDETHITNG 120 LEMPSEHAKD TAKKWSAEDE ISLANAVLAS SAGGQVNMTA FYERAKETLQ SESHGQIYEK 180 MRRMRSRFWT IESQLRDAKI AEDFFPYRSM HEADLYKVWK QIWGRHERRN EAAQDIEMEQ 240 NRELRSRSHA RQVHNGDVNE DRHESRTEAA HMNGEPRSHS HAMQRQNGEV TDDPPEEEEE 300 EEEEEHQQAE EEDNVVETAG KTPSRVACNH DEEFNLIQTE IKALVCKVKN NVQTMLDDTE 360 AKMEGLIDSL FKRAVVAAQV QSLGSEVGIG SCLCSSLSRR MKELECVRSV REFPGLNEAE 420 AKILQQKWRK HQIEELRTFS GRLELLQEEC KLCIKDLETA NSSHNS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence Send to blast

MSSSALPSSS DDGDARSHAK PNSTPPTKSS AASSDSEPKT PRRSSVMKKS RDGSRPDTRV  60
WPKQSRDRLE AKLPASKKKK NSRKTGVSGN KSQIDIEELL AQTYPKEPSV LGDETHITNG  120
LEMPSEHAKD TAKKWSAEDE ISLANAVLAS SAGGQVNMTA FYERAKETLQ SESHGQIYEK  180
MRRMRSRFWT IESQLRDAKI AEDFFPYRSM HEADLYKVWK QIWGRHERRN EAAQDIEMEQ  240
NRELRSRSHA RQVHNGDVNE DRHESRTEAA HMNGEPRSHS HAMQRQNGEV TDDPPEEEEE  300
EEEEEHQQAE EEDNVVETAG KTPSRVACNH DEEFNLIQTE IKALVCKVKN NVQTMLDDTE  360
AKMEGLIDSL FKRAVVAAQV QSLGSEVGIG SCLCSSLSRR MKELECVRSV REFPGLNEAE  420
AKILQQKWRK HQIEELRTFS GRLELLQEEC KLCIKDLETA NSSHNS

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT122338	0.0	BT122338.1 Picea sitchensis clone WS0443_M10 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	D5A857	0.0	D5A857_PICSI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	3e-06	DNA-binding storekeeper protein-related transcriptional regulator