PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_944867g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Dof

Protein Properties

Length: 326aa MW: 35931.4 Da PI: 6.8331

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_944867g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.1	4e-38	129	188	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k ++cprC+s++tkfCy+nny+++qPr+fCk+CrryWt+GG++rn+PvG+grrk+k+ MA_944867g0010 129 PSKPVACPRCHSSETKFCYFNNYNVNQPRHFCKNCRRYWTAGGTMRNIPVGAGRRKSKHF 188 67899****************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-25	128	186	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.9E-31	132	187	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.323	133	187	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	135	171	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence Send to blast
MCKSSLGQAC NVDCESETRN SVIKLFGTTI SVSVSDGKAD EFLQEDACKR GKADEFLQED 60 ACKRPAQPFK TENLGERKAK SLRTENILEK SVKSQSSCDG GEKSLKPLRF EEFTDGKSEK 120 ASERAPPKPS KPVACPRCHS SETKFCYFNN YNVNQPRHFC KNCRRYWTAG GTMRNIPVGA 180 GRRKSKHFTT FQLHSASKSL DLQEPEGRIE NFEEPVNETR IFSFNDEATS VSSVTGVAGI 240 DMKVPCLEEM DAAISDSFVN SLTVNGVSGT GFSNLMDPGL KIKAISTENS QWIPEIQQNS 300 NSALLADCCV LYGKPMIPNC TQQAAE

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT105026	0.0	BT105026.1 Picea glauca clone GQ02817_M14 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	T2B8N3	0.0	T2B8N3_PINPS; Dof4

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP38	17	445

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	7e-35	cycling DOF factor 3