PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_9856146g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family MYB_related
Protein Properties Length: 132aa    MW: 15483.2 Da    PI: 6.9738
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_9856146g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.3e-1163104447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      WT+eE e++  a k++G++ +++Ia+ +g +R   q++ + qky
  MA_9856146g0010  63 WTKEEREKFHVALKMFGTD-FEAIAEFVG-TRNSTQVRTHAQKY 104
                      *******************.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.38358109IPR017884SANT domain
Gene3DG3DSA:1.10.10.603.2E-658107IPR009057Homeodomain-like
SMARTSM007172.8E-959107IPR001005SANT/Myb domain
SuperFamilySSF466891.94E-1260108IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-761107IPR006447Myb domain, plants
PfamPF002499.0E-1063104IPR001005SANT/Myb domain
CDDcd001671.18E-863104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
DSFLNVHPEP YMQADFSGFE DFKYFQNEIF HPTEQIEIMK AQDEQGEVPL PVETKKVSEN  60
RYWTKEEREK FHVALKMFGT DFEAIAEFVG TRNSTQVRTH AQKYYAKMVR DYKKNGKASQ  120
TQNKGQKSSS NN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024388373.17e-37myb-like protein I isoform X3
TrEMBLA9SHY22e-35A9SHY2_PHYPA; Predicted protein
STRINGPP1S80_153V6.12e-37(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1164447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37260.12e-12MYB_related family protein