PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000122739
Common NameDREB5-1
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 201aa    MW: 22231.9 Da    PI: 5.1022
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000122739genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-181463255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +ykGVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  MDP0000122739 14 RYKGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDAAALHLKG 63
                   6*****999.**********8...557***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.90E-191372No hitNo description
SuperFamilySSF541713.07E-201471IPR016177DNA-binding domain
PROSITE profilePS5103222.3521471IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-291473IPR001471AP2/ERF domain
PfamPF008471.2E-111463IPR001471AP2/ERF domain
SMARTSM003808.7E-321477IPR001471AP2/ERF domain
PRINTSPR003672.4E-111526IPR001471AP2/ERF domain
PRINTSPR003672.4E-115373IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MEPQAADCRV SPARYKGVRK RKWGKWVSEI REPGKKTRIW LGSYEAPEMA AAAYDAAALH  60
LKGCGAALNF PEMADSLPRP ASSSAMDVQL AAQEAALRVR RQQLPMEAFP KEEAGDSSRG  120
LSSAPVTVGL SPSQIQAINE SPLDSPKMWM QYMCRAHGHE APSSLGGDLW DTDNSSPNKY  180
YEGDVESMDY EDMQHWSIWD P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-151576668ATERF1
3gcc_A2e-151576668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11521KGVRKRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ6698200.0JQ669820.1 Malus x domestica dehydration-responsive element-binding protein (DREB5) (DREB5-1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008368126.21e-147ethylene-responsive transcription factor ERF022-like
SwissprotQ9LQ281e-46ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLA0A3Q9NC241e-145A0A3Q9NC24_MALDO; DREB transcription factor
TrEMBLA0A3T0CIY01e-145A0A3T0CIY0_9ROSA; DREB transcription factor
STRINGXP_008339090.11e-147(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.18e-48ERF family protein
Publications ? help Back to Top
  1. Zhao T,Liang D,Wang P,Liu J,Ma F
    Genome-wide analysis and expression profiling of the DREB transcription factor gene family in Malus under abiotic stress.
    Mol. Genet. Genomics, 2012. 287(5): p. 423-36
    [PMID:22526429]