PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000129112
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 489aa    MW: 53540.2 Da    PI: 6.9038
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000129112genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.27.4e-13408453348
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                    + +r++r++kNRe+A rsR+RK+a + eLe  +  Le+eN++L ke
  MDP0000129112 408 AQQRQKRMIKNRESAARSRERKQAXQVELESLAVRLEEENEQLLKE 453
                    679**************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.2E-12402453No hitNo description
SMARTSM003387.8E-9406464IPR004827Basic-leucine zipper domain
PfamPF001703.3E-11408453IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.323408453IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-9410454No hitNo description
CDDcd147073.70E-16410455No hitNo description
PROSITE patternPS000360413428IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MAIAGAVKDL RNQRHEVKGH CWNKNLCDLQ WTHRHITEQL TEILTGSKLG WRWRLMRRYS  60
AVDKELDGLT STMENAVEAS AVPAVREDTV AESTNIPKGR LVQNRHPAKL ALLRGHTHIP  120
YTPTPIAPFR GAHVPESGNC FASLVEKAAP LCAAVRGTLK IPNLVSEREW TESQVPEKSA  180
TEEMASSKLM SSSSRSQNSD LSRRPSSFSS ATKPKPTTTT PHPSSSSAHP QTLSNYQNSI  240
VNTTPSLPIG SMTADGLLYD PTSMTDATLL DTQITLLDAA ADVNGSSAPP PKTVDEVWRE  300
IVSGESRKEC KAEVPDEMMT LEDFLARAGA VEENDIKDFP LAPPPEMERL SSGVFSFDQI  360
PLSPFGSIDK VEGSIVGFGN GADPAGSGGG VGRGKRGRAV MEPMDKAAQQ RQKRMIKNRE  420
SAARSRERKQ AXQVELESLA VRLEEENEQL LKEQVTELRF GLLLATDLGE KCVFPLRNGS  480
RRVCDHLQN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008339093.20.0G-box-binding factor 4-like
TrEMBLA0A498K3120.0A0A498K312_MALDO; Uncharacterized protein
STRINGXP_008339093.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.15e-36bZIP family protein