PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000133017
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 410aa    MW: 46118.4 Da    PI: 9.0266
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000133017genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.21.2e-30107160255
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     rlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ++R+
  MDP0000133017 107 SRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMHRS 160
                    69***************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-28103161IPR009057Homeodomain-like
PROSITE profilePS5129412.976103163IPR017930Myb domain
SuperFamilySSF466891.54E-14104161IPR009057Homeodomain-like
TIGRFAMsTIGR015571.0E-21107162IPR006447Myb domain, plants
PfamPF002495.2E-9108159IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MVKEKYDEFK IWPSLAHQYH IIGKQNIKRL GMKSESTSME EVSKSSPSTS KKEYDHEDDE  60
GEEDEVDEDG LQLSNNGVSS SNSTIDENHE KKGASGSVRQ YVRSKTSRLR WTPDLHLRFV  120
HAVERLGGQE RATPKLVLQL MNVKGLSIAH VKSHLQMHRS KKMEDPNQVL TDXAGFFMEG  180
GDNQLYNLTQ LSMLQSXKKW PSSGLRYGAT DHSXWQGRHH HHQIYGPYRS SRTTALLDHN  240
TRNIELYGSV AERILGSNNN NIRTTSANQL HTNLPSPNPG QITWRRHQIT RDESCQTVIH  300
RPCQDHHSWS AAIRDHQGQN MLKRMAFDXD NSDLDLNLSL KVPPKHGHGF GKGLQCGGDN  360
HQKLHMGCSL SLSLSSSSSS KLGVKKLEGT TGYGDSKHGK NMASTLDLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-16107162257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-16107162257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-16107162257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-16107162257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16107162358Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008362730.20.0uncharacterized protein LOC103426420 isoform X1
TrEMBLA0A498KMP10.0A0A498KMP1_MALDO; Uncharacterized protein
STRINGXP_008362730.10.0(Malus domestica)
STRINGXP_008374230.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-43G2-like family protein