PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000141948
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 917aa    MW: 102359 Da    PI: 9.2631
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000141948genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.91.1e-082142581357
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                    NR +A rs +RK ++  eLe+kv++L++e ++L  ++  l+++++
  MDP0000141948 214 NRQSAARSKERKVKYANELERKVQTLQTEATTLSAQVTLLQEKSQ 258
                    ****************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-7199266IPR004827Basic-leucine zipper domain
CDDcd147036.18E-19211254No hitNo description
SuperFamilySSF579591.31E-8211256No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-9213258No hitNo description
PfamPF001705.0E-7213259IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.714214256IPR004827Basic-leucine zipper domain
Gene3DG3DSA:3.30.200.204.7E-12809888No hitNo description
SuperFamilySSF561122.26E-10810884IPR011009Protein kinase-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 917 aa     Download sequence    Send to blast
MDSNNVNNNF GAAAGPFPTF NDMEQMSETP QRGSHHRRAH SDTSFRTPNF DDLLLFDPSD  60
LDLSCLASPN LPPRGSDSDN IAMFLESDDS SGGQPPNPFS STPKPTASSG STATAAHLRS  120
LSVDSDFFDG LGLGDSGREL TGGQRSRSHR HSISMDGSSI EADSSVITLN GFKKSIAPER  180
LAELSLTDPK RAKRFFLQQI SIKLFAIELM ILANRQSAAR SKERKVKYAN ELERKVQTLQ  240
TEATTLSAQV TLLQEKSQTS LLQFKGRCLV LDSCFLAEVK VFSLTPHYNG ILIGLFSREK  300
VITDLISSRA LVVCRYNRKT RVYHVLLSMV QRDTTVITAE NKELKLRLQA LEQQSQLRDA  360
LSEKLKEEAQ RLKIEANQIR PGAGNGNPFY GGLPPQYAPA ASQPGRRQWA GSPELHGFQR  420
EGIEALQEII NHSLGLKAVK IAAHTSTHRT PQFPRLYHHX LCWPPLLRNV NXSSFCYDRF  480
RNCCLMVLXS SLFGFTFQFS SLSLLQVXTS GDSHLILSPL EKXFPIHXWH NGVQGNRIMT  540
YNLFGYCHCH MPGRDGTKTP CVERFFSLPG RTASKSGGLI EGWGLRICST YEGGSFAHYS  600
HVVXYDECYR GHLLSVVEET CRTHSRYVYQ AIESLVDGVS SLPKIRYYAP PEVGNNPHST  660
TGTARPSQPP SPKQSRSEGV LSPSCVTAHT YSQEEFLHMG KHYHSSNKGK LEHGGPNDVL  720
NKSAETSYLN KVSMVEAKTS DKNPPSRISP TQKSVNVPAV WRSLLKVAKM TSIYKGSTGS  780
DVSDESNSSS LSSAIYKPHK ANDVRWEAVM DKASLASRKK LLRAQIEREI LQSLDHPFLP  840
TLYTHFETEK VSCLVMEFYP RGDLHVLREK QPGKHFPEHA ARQAWNEAIL NGNDIHGRRV  900
KQRLDLQKLI EKSRDRX
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.215381e-152root| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52143450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.14e-25bZIP family protein