PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000148746
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 169aa    MW: 19471.8 Da    PI: 4.4706
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000148746genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.83e-21251521128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                    +p GfrFhPtd+el++++L ++v +++  + + i e+d++ k+ Pw   +++ +   e++++yfF++   +++   r +r + + g+W+++ + k+
  MDP0000148746  25 MPLGFRFHPTDQELISFFLYNRVLHRDYCE-NLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLTARSQ--ARIKReIDAGGTWSESNS-KP 116
                    699************************777.88****9873678899865443344488999*****988765..58888456689**98766.67 PP

            NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    v++  +++++g k+ L + k  +   +  dW+++ey++
  MDP0000148746 117 VKDLeNEKAIGKKRNLRYEK--EGCEHDGDWLLEEYSI 152
                    766548889********984..4444589*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-2318155IPR003441NAC domain
PROSITE profilePS5100524.27825169IPR003441NAC domain
PfamPF023659.1E-1726152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MEKEGYGGIV PLGFYENQLL GSNGMPLGFR FHPTDQELIS FFLYNRVLHR DYCENLIYEF  60
DLFGKTPPWV VWENFGGPGL EDQDLYFFCQ LTARSQARIK REIDAGGTWS ESNSKPVKDL  120
ENEKAIGKKR NLRYEKEGCE HDGDWLLEEY SILPSVFGCA DDSDHEIGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385051.21e-123NAC domain-containing protein 41-like
TrEMBLA0A498HU722e-98A0A498HU72_MALDO; Uncharacterized protein
TrEMBLA0A498IRZ71e-97A0A498IRZ7_MALDO; Uncharacterized protein
STRINGXP_008385050.11e-123(Malus domestica)
STRINGXP_008385051.11e-123(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.11e-15NAC domain containing protein 94