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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MDP0000154566 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
C2H2 |
| Protein Properties |
Length: 159aa MW: 17707.7 Da PI: 8.7714 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000154566 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.5 | 0.0001 | 46 | 68 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
MDP0000154566 46 FSCNYCQRKFYSSQALGGHQNAH 68
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MDFQPNTSLR LNLPNNRLNL ELVLEPSSTS SSSSSFSPTL EPQRMFSCNY CQRKFYSSQA 60
LGGHQNAHKL ERTLAKKSRE QQLSSAARAH SSMNQRPGSN YSCSSDSSIS HARDIPQAHL 120
GGLKVRQGHA GRFVGEMNCG FRPENVEEDI CHLDLSLRL
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Highly expressed at in the abscission zone (AZ) of petals, stamens, sepals and siliques. Expressed at lower levels in stamens, carpels, cotyledons, major veins of rosette leaves, trichomes of inflorescence leaves and stems. {ECO:0000269|PubMed:18192438}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs. {ECO:0000269|PubMed:18192438}. |
