PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000164300
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 128aa    MW: 14977.7 Da    PI: 9.4381
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000164300genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.92.3e-13851112652
        G2-like  26 kAtPktilelmkvkgLtlehvkSHLQk 52 
                     AtPk+i+elmkv+g t+++vkSHLQk
  MDP0000164300  85 AATPKQIRELMKVDGFTNDEVKSHLQK 111
                    69************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-1083112IPR009057Homeodomain-like
TIGRFAMsTIGR015578.9E-1185112IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MQLPQTMSVA XLFTPKIXSF YEEFYGFKGV KFVKGIILSS FDIDSDGKRW IPXKISKXFF  60
WKCCTGRFVL ATLCFVLANP YKFRAATPKQ IRELMKVDGF TNDEVKSHLQ KLEVILHVIS  120
DEFFYTYM
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.256731e-37leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498JVW17e-40A0A498JVW1_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3800622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-11G2-like family protein