PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000171771
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 377aa    MW: 42667.4 Da    PI: 4.8318
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000171771genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.92.4e-20251521128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                    +p GfrFhPtd+el++++L ++v +++  + + i e+d++ k+ Pw   +++ +   e++++yfF++   +++   r +r + + g+W+++ + k+
  MDP0000171771  25 MPLGFRFHPTDQELISFFLYNRVLHRDYCE-NLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLTARSQ--ARIKReIDAGGTWSESNS-KP 116
                    699************************777.88****9873678899865443344488999*****988765..58888456689**98766.67 PP

            NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    v++  +++++g k+ L + k  +   +  dW+++ey++
  MDP0000171771 117 VKDLeNEKAIGKKRNLRYEK--EGCEHDGDWLLEEYSI 152
                    766548889********984..4444589*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.29E-2318175IPR003441NAC domain
PROSITE profilePS5100526.45625178IPR003441NAC domain
PfamPF023657.4E-1626152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MEKEGYGGIV PLGFYENQLL GSNGMPLGFR FHPTDQELIS FFLYNRVLHR DYCENLIYEF  60
DLFGKTPPWV VWENFGGPGL EDQDLYFFCQ LTARSQARIK REIDAGGTWS ESNSKPVKDL  120
ENEKAIGKKR NLRYEKEGCE HDGDWLLEEY SILPSVFGCA DDSDHEIGKV VLCRXKKNSR  180
SGNKKNCSNS TQQVNKQPAK KRARKEVMEK PAKKRARKEV KEKPAKTKAR NKVGSQNTTS  240
VITHTIEELQ NCPGTSSAPV XPFDESNYKM ISDAIDHDQQ CISNIDGSTM PASFSDHDYV  300
SRSLVGEGGE SLLKDEDFLI ESGEEMFFDL DDLFAPLDCG SAWSQEKLPQ IDETQVPLPL  360
DGMTCWNDCL WMGNCVQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385051.20.0NAC domain-containing protein 41-like
TrEMBLA0A498IRZ70.0A0A498IRZ7_MALDO; Uncharacterized protein
STRINGXP_008385051.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.12e-15NAC domain containing protein 94