PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000176584
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family Dof
Protein Properties Length: 271aa    MW: 30274.6 Da    PI: 10.2701
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000176584genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof284.8e-09225268346
         zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGal 46 
                    +k+l+cprCds+nt f  +   + s+P   Ck  +r W + G l
  MDP0000176584 225 KKILPCPRCDSRNTTFDKFSRNNPSKPVXACKDXKRSWVARGNL 268
                    67899*********************************999977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.2E-8226268IPR003851Zinc finger, Dof-type
ProDomPD0074785.0E-4226268IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MVRLRLTGGT KXETTSRGEE TGDQVXLIDL QGDSAQAGKC FCVLLFMQKV RSFREKRSSI  60
PGRSARATLP FTTVLSENAF SASGTKSRTG PENSWTSSET KKYKIGDQTD GFAKVSIQSL  120
HEENMKLIQL VSETKNANVV AVSICKCVEN LVELEKIREA SKALVKEDDR DVKEKPGIQK  180
RDVKRKRPAE KKLQKKDGRE EACSSRPALQ PCGDEIVRAR EEAYKKILPC PRCDSRNTTF  240
DKFSRNNPSK PVXACKDXKR SWVARGNLGR G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028959856.11e-91cyclic dof factor 2-like isoform X1
TrEMBLA0A498JS324e-90A0A498JS32_MALDO; Uncharacterized protein
STRINGXP_009369287.13e-87(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.14e-07Dof family protein