PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000177041
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 341aa    MW: 38562 Da    PI: 4.8317
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000177041genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.67.5e-1781171106
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                    +p GfrFhPtd+elv+ yL+ ++ + k   + +++e++++ ++ Pw   +++ +    +++++fF + ++++ +++r++r + + g+W++t +dk 
  MDP0000177041   8 MPLGFRFHPTDQELVSSYLRDRALSGKPLGNPFVHEFNLFgQTPPWVVWEQFGGnslLDQDLFFFYELRSRSDSDSRSKRqIEAGGTWSETSSDKV 103
                    699*****************9987777555577****98725688888654433223456889999999999999999995556899******998 PP

            NAM  92 vlskkgelvglkktL 106
                    +   +g  +g k+ +
  MDP0000177041 104 LGL-DGIPIGDKRHF 117
                    777.88888888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-194118IPR003441NAC domain
PROSITE profilePS5100522.2438163IPR003441NAC domain
PfamPF023651.3E-109115IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MEVGYYGMPL GFRFHPTDQE LVSSYLRDRA LSGKPLGNPF VHEFNLFGQT PPWVVWEQFG  60
GNSLLDQDLF FFYELRSRSD SDSRSKRQIE AGGTWSETSS DKVLGLDGIP IGDKRHFRNP  120
RSRCGNKMNS SSPTHDFNEK PPIKRAIKEV SNEKLLIKRK RARKEPGSQK HSNVNVITNT  180
PAVVPFVGTE SNMITDTRYW DQECITNING NAKPTDFSDQ DSVILMSDVP SYPICLDGDT  240
TNHDQGCISY INGNVMPIPT HISGHEYVPL MSDVPSSPVF LGGEEYPLDG EAVRGDIKEW  300
LTTLEGKLPR EWPQIDEFSQ PLDGFNYWTD CLWMSDSVND Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954569.10.0NAC domain-containing protein 41-like
TrEMBLA0A498K0F40.0A0A498K0F4_MALDO; Uncharacterized protein
STRINGXP_008345289.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3804722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.14e-10NAC domain containing protein 45