PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000183562
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 360aa    MW: 40657.8 Da    PI: 7.0906
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000183562genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.82.7e-1485137557
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                    +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +
  MDP0000183562  85 RKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHSLIDRLNNVSESRD 137
                    79*******************************************99988766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1581145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.97883146IPR004827Basic-leucine zipper domain
PfamPF001702.4E-1285137IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-1285134No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-1285159No hitNo description
CDDcd147021.34E-2186134No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MLPGEIISGL HYFESEIPLR NPSDYAFMHN QIPSHHFNTL FNNLSHQIPP PPGHDFTQQS  60
SSLSYNSSTS DDAEEHHHLR VIEERKQRRM ISNRESARRS RMRKQKHLDE LWSQVVRLRN  120
ENHSLIDRLN NVSESRDRVV EENARLKEEX SDLRQMLTNL QIGSPYNINA STFRELDSDF  180
FIILQSTSPP SYINXANRLV FITLILQSTS PPSDINLANR GVFITLKMDA LEHDKRDKEK  240
GMYSAGCTQE FALLAAYTTV KCTCSCSEPE TNSGNRRKTR SGGGGGGASG GSSCKNVGLL  300
CENKTFEKPN QASIIAFVNE FECPAKKADA SGAASTVDLP FYXALLEHTH MHLPYIMQHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197104RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.243150.0fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008377571.11e-126basic leucine zipper 43-like
TrEMBLA0A498HKN41e-125A0A498HKN4_MALDO; Uncharacterized protein
STRINGXP_008377571.11e-126(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-38basic leucine-zipper 42