PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000202704
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ARR-B
Protein Properties Length: 744aa    MW: 83358.7 Da    PI: 5.6989
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000202704genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.58.3e-20255304555
        G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    +Wt+eLH +F  a++ L G +kA P++il+ m+v+++t+ +v+SHLQkYR 
  MDP0000202704 255 VWTTELHLKFTAAISAL-GDQKARPRRILKWMNVPDITVRQVASHLQKYRK 304
                    7****************.9*******************************6 PP
2Response_reg56.12.1e-19211281109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    +l+vd + l ++ +++ lek  + +v++++ ++ al ++ke++  +Dl++  i+mp+ d + ll+ ++++e  +p+i+++++ + + a++al  Ga
  MDP0000202704  21 ILVVDHDTLSLMCIASTLEKYSF-KVTTTALASVALSMIKEQKyhYDLVMANISMPDKDKFSLLQVLHKNE--IPVIFMSSEVNIDVAKKALAEGA 113
                    89*********************.***************888888************************98..*********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                      fl Kp++ e+l +
  MDP0000202704 114 CFFLQKPVSSEDLKN 128
                    ***********9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.13E-2417142IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.7E-2518146No hitNo description
SMARTSM004481.2E-1519130IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011031.60320134IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.5E-1621128IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.32E-1822133No hitNo description
Gene3DG3DSA:1.10.10.605.3E-19250309IPR009057Homeodomain-like
SuperFamilySSF466891.61E-14250306IPR009057Homeodomain-like
TIGRFAMsTIGR015578.2E-18255305IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    Send to blast
MEDMSPKESN GLPSFAHGLQ ILVVDHDTLS LMCIASTLEK YSFKVTTTAL ASVALSMIKE  60
QKYHYDLVMA NISMPDKDKF SLLQVLHKNE IPVIFMSSEV NIDVAKKALA EGACFFLQKP  120
VSSEDLKNVW QHAYRKVRNP RKDTHKTKCG KKIHEAGGVL IPPTGGIRIH EVGGVSRLPT  180
GRELCLDTQD TRDERQIAAE NYTQGALGIN RPVDDKEDQE KAKKVKLNTE QDCDEEGMEN  240
QDCDGSSKRK KWHPVWTTEL HLKFTAAISA LGDQKARPRR ILKWMNVPDI TVRQVASHLQ  300
KYRKNVHRIQ EVGTTSLPSL GKSSIWNNRN EFPPARQTSL VCHLYEQRTS SSGAQGNPTQ  360
LMTPNSFTGF NDYRRQNLYT EHRVMSHNTN HQSESLYDFY LRTQGKFENL DQILETNSFT  420
LGADMNKIER NQPLGLEEIM FKASERTLPS TNYMTPEFGS PYISANTFQV PNASVSINQA  480
QNYCPAPTAP FNAQNQDHFS AEATRTTEVG LNQAQFYAPA PTTPINSQNQ NHFSAEATRT  540
TEVGMNQAQF YAPAPTTPIN SQNQNHFSAE ATRTTEVGMN QAQFYAPALN TPINSQNENY  600
FSADVMGTTE AGMNQPQYYT PAPTAPIYFQ NQNHFSAEVT GTTDVLEVVP EQIPSVNETN  660
AETFPANFTG GSQELDAAAR EAHPASSNNN QPMSEYDDLL KLLEEDPEKF NWFEPFDSAP  720
NAGDANRYRA WLTETLLEKS PDSP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018502937.10.0PREDICTED: putative two-component response regulator ARR19
TrEMBLA0A498HIR00.0A0A498HIR0_MALDO; Uncharacterized protein
STRINGEMJ260480.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-41response regulator 2