PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000203462

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

BES1

Protein Properties

Length: 103aa MW: 11572.4 Da PI: 9.6556

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000203462	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	159.8	1.8e-49	5	76	1	72
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72 g+sgr ptwkErEnnkrRERrRRaiaak+y+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrk MDP0000203462 5 GSSGRLPTWKERENNKRRERRRRAIAAKMYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKI 76 689*******************************************************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.8E-45	6	77	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKMYSGLRAQ GSYKLPKHCD NNEVLKALCA 60 EAGWVVEEDG TTYRKISACK IILDLVLVDF VNPCFLVEIP AGF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	9e-26	9	80	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	9e-26	9	80	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	9e-26	9	80	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	9e-26	9	80	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.12130	1e-104	bud\| cell culture\| fruit\| leaf\| stem

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008338783.2	7e-36	BES1/BZR1 homolog protein 2-like
Refseq	XP_010675300.1	3e-36	PREDICTED: BES1/BZR1 homolog protein 4
Swissprot	Q9S7F3	3e-28	BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBL	A0A2P6RMR5	2e-45	A0A2P6RMR5_ROSCH; Putative transcription factor BES/BZR family
STRING	XP_010675300.1	1e-35	(Beta vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15152	11	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50750.1	4e-30	BES1/BZR1 homolog 1

Link Out ? help Back to Top
Phytozome	MDP0000203462