PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000203904
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 543aa    MW: 59744 Da    PI: 8.4807
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000203904genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.23.2e-07185231147
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                    eke +r rr   NRe+Ar   +R++a +eeL++k++ L  eN+ L+ 
  MDP0000203904 185 EKEERRIRRVLANRESARQTIRRRQALCEELTRKAADLALENENLRR 231
                    78999**************************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-5182240No hitNo description
SMARTSM003386.6E-8185249IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.128187240IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.96E-6189244No hitNo description
CDDcd147022.97E-10195231No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MVSSEGRSFS SSTGSTAAGS SSSPDSGSYS SSTNGAVERF GGSGGGVDXM VKEELEAAEA  60
LADLAHLAMR ESSGAESXGN WGLKRKRAGK RVKSGSPPSQ SGLYPPDPAP TCPDLPQDQA  120
VTGLRQCETV CTNVVTELVK TEQVLSEKVV RAEHDPELNK PSPICTTSXP SFSCSKSRRN  180
LTEEEKEERR IRRVLANRES ARQTIRRRQA LCEELTRKAA DLALENENLR RSRAYLTIEV  240
LILFTSLNPK KKELAXKEFQ SLEKTNKHLK VQMTKVIRAE DEKTAGENMS AYVQMQIPPS  300
SSTNSPFFLF NRPPFAPLFW PSIIQSSNST QVQHIPQNPI AIPSNISLPA NGAAGSSLEQ  360
DNPSNINGAR APLYVFPCPW FIPHFDNGNG LQPQSSLCLN NKQEETSFNN PFSANSSSRT  420
VAQLDNHQSS FPVRLKTEDS PSIEGRPSCD LNETPAQFPL DGGDQHTDLT RWKMVARKYS  480
LLLHHSTIPE LHLFSALPDE NSEPIIYPTR KLADANAAAE ARKRRKNLTK LKSLHGRQCR  540
TQC
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.109930.0bud| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009374746.10.0PREDICTED: uncharacterized protein LOC103963637
TrEMBLA0A498IDN50.0A0A498IDN5_MALDO; Uncharacterized protein
STRINGXP_009374746.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.17e-57bZIP family protein