PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000236212

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

bZIP

Protein Properties

Length: 103aa MW: 11812.9 Da PI: 11.4193

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000236212	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.6	5.4e-08	61	103	11	53
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 + NR +A +s qRKk +++ Le +++L+ e aL+ +le +k MDP0000236212 61 MTNRRSAMKSKQRKKVYVQTLECNIQKLQFEAAALIAQLELWK 103 67*************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57959	4.1E-8	59	101	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.3E-8	61	101	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
MYGSSSTFSK DDHVISIPST KKGRLQLMKK SPNGIQSLRK GIFSRIFVTR NARNCSKSMI 60 MTNRRSAMKS KQRKKVYVQT LECNIQKLQF EAAALIAQLE LWK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008372680.2	6e-35	probable transcription factor PosF21
TrEMBL	A0A498JR49	4e-34	A0A498JR49_MALDO; Uncharacterized protein
STRING	XP_008372680.1	7e-34	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF22886	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06850.1	5e-09	basic leucine-zipper 52

Link Out ? help Back to Top
Phytozome	MDP0000236212